Software
PHANTAST
The phase contrast microscopy segmentation toolbox (PHANTAST) is a collection of open-source algorithms and tools for the processing of phase contrast microscopy (PCM) images.
It was developed at University College London's department of Biochemical Engineering and CoMPLEX.
The software can be found here: link
Downloads:
FIJI: link
MATLAB: link
If you found PHANTAST useful for your research, please cite the original paper where it was first described:
Jaccard, N. et al. Automated method for the rapid and precise estimation of adherent cell culture characteristics from phase contrast microscopy images. Biotechnol. Bioeng. 111, 504–17 (2014).
The phase contrast microscopy segmentation toolbox (PHANTAST) is a collection of open-source algorithms and tools for the processing of phase contrast microscopy (PCM) images.
It was developed at University College London's department of Biochemical Engineering and CoMPLEX.
The software can be found here: link
Downloads:
FIJI: link
MATLAB: link
If you found PHANTAST useful for your research, please cite the original paper where it was first described:
Jaccard, N. et al. Automated method for the rapid and precise estimation of adherent cell culture characteristics from phase contrast microscopy images. Biotechnol. Bioeng. 111, 504–17 (2014).